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Samtools Samtools is a suite of programs for interacting with high-throughput sequencing data. It consists of three separate repositories: Samtools Reading/writing/editing/indexing/viewing SAM/BAM/CRAM format BCFtools Reading/writing BCF/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants HTSlib A C library for reading/writing high-throughput sequencing ...

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htslib.org was registered 1 decade 3 months ago. It has a alexa rank of #1,085,343 in the world. It is a domain having .org extension. It is estimated worth of $ 1,200.00 and have a daily income of around $ 5.00. As no active threats were reported recently, htslib.org is SAFE to browse.

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Income Per Day: $ 5.00
Estimated Worth: $ 1,200.00

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Alexa Rank: 1,085,343
PageSpeed Score: 82 ON 100
Domain Authority: 49 ON 100
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Web Server Information

Hosted IP Address:

193.62.203.106

Hosted Country:

United Kingdom GB

Location Latitude:

52.6333

Location Longitude:

1.11667

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Search Engine Results For htslib.org

Samtools

- http://www.htslib.org/

HTSlib A C library for reading/writing high-throughput sequencing data. Samtools and BCFtools both use HTSlib internally, but these source packages contain their own copies of...


GitHub - samtools/htslib: C library for high-throughput ...

- https://github.com/samtools/htslib

May 26, 2020 · HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for high-throughput sequencing data, and is...


GitHub - samtools/www.htslib.org: The …

- https://github.com/samtools/www.htslib.org

The http://www.htslib.org/ web site. Contribute to samtools/www.htslib.org development by creating an account on GitHub.


Htslib :: Anaconda Cloud

- https://anaconda.org/bioconda/htslib

conda install linux-64 v1.11; osx-64 v1.11; To install this package with conda run one of the following: conda install -c bioconda htslib conda install -c bioconda/label/broken...


Bioconductor - Rhtslib

- https://www.bioconductor.org/packages/release/bioc/html/Rhtslib.html

HTSlib high-throughput sequencing library as an R package. Bioconductor version: Release (3.12) This package provides version 1.7 of the 'HTSlib' C library for high-throughput...


How to Install SamTools, HTSLib, and BCFTools on …

- https://www.biostars.org/p/328831/

Thank you otwtgin2010 for the work. Others may benefit from it, if they want to compile these softwares from source. Another option would be to use the Anaconda package manager....


Samtools repositories

- https://samtools.github.io/

Samtools organisation for next-generation sequencing developers: htslib C API, htsjdk Java API, file format specifications, and samtools/bcftools source code. Samtools...


HTSlib | Ohio Supercomputer Center

- https://www.osc.edu/resources/available_software/software_list/htslib

HTSlib is a C library used for reading and writing high-throughput sequencing data. HTSlib is the core library used by SAMtools.  HTSlib also provides the bgzip, htsfile, and...


Htslib - Research Computing Documentation

- https://wiki.rc.usf.edu/index.php/Htslib

Feb 21, 2017 · Description. From the Htslib Home Page: HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM, CRAM and VCF, used for...


htslib — Homebrew Formulae

- https://formulae.brew.sh/formula/htslib

Homebrew’s package index. htslib. C library for high-throughput sequencing data formats. https://www.htslib.org/


pysam: htslib interface for python — pysam 0.15.0 ...

- https://pysam.readthedocs.io/

This module provides a low-level wrapper around the htslib C-API as using cython and a high-level, pythonic API for convenient access to the data within genomic file formats....


SAM tools - Browse /samtools/1.11 at SourceForge.net

- https://sourceforge.net/projects/samtools/files/samtools/1.11/

* `make all` now also builds htslib_static.mk and htslib-uninstalled.pc. Thanks to John Marshall. (#1011) * Various cppcheck-1.90 warnings have been fixed. (#995, #1011) *...


Bcftools by samtools

- https://samtools.github.io/bcftools/

Download www.htslib.org. This is the official development repository for BCFtools. It contains all the "vcf..." commands which previously lived in the htslib repository (such as...


Installation of samtools and htslib on centos 7.4 - YouTube

- https://www.youtube.com/watch?v=K0nqWT3gv8A

May 24, 2018 · Here I am showing installation of samtools and htslib on Centos 7.4. I am Bioinformatician and Systems Administrator


SAM tools / Re: [Samtools-help] Issue Building htslib and ...

- https://sourceforge.net/p/samtools/mailman/message/36119199/

Re: [Samtools-help] Issue Building htslib and samtools 1.6 on HighSierra OSX 10.13.1 From: Robert Davies - 2017-11-20 17:20:47 On Fri, 17 Nov 2017, VIB | Stephane...


pysam · PyPI

- https://pypi.org/project/pysam/

Hashes for pysam-0.16.0.1-cp27-cp27m-manylinux1_x86_64.whl; Algorithm Hash digest; SHA256: 9e3597a49e4bc72c31199d6231018ad3034e08a8243b9f8086953afb2ab5a3af


How Can I Convert Bam To Sam?

- https://www.biostars.org/p/1701/

Hi , When i am converting Sam to Bam and back to Sam.I am loosing quality score of the Sam file. i.e. Input sam and the reversed sam does not match.Is this expected?


htslib - What's the difference between VCF spec versions 4 ...

- https://bioinformatics.stackexchange.com/questions/344/whats-the-difference-between-vcf-spec-versions-4-1-and-4-2

vcf htslib file-formats. share | improve this question | follow | edited Jun 8 '17 at 8:47. Daniel Standage. 4,273 8 8 silver badges 37 37 bronze badges. asked Jun 1 '17 at...


pysam - An interface for reading and writing SAM files ...

- https://pysam.readthedocs.io/en/latest/api.html

Introduction¶. Pysam is a python module that makes it easy to read and manipulate mapped short read sequence data stored in SAM/BAM files. It is a lightweight wrapper of the...

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Websites Hosted on Same IP (i.e. 193.62.203.106)

Human Cell Atlas – To create comprehensive reference maps of all...

- humancellatlas.org

  1,586,184   $ 720.00

Home | Wellcome Genome Campus

- wtgc.org

  Not Applicable   $ 8.95

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Domain Information

Domain Registrar: Public Interest Registry
Registration Date: 2014-08-01 1 decade 3 months 2 weeks ago

Domain Nameserver Information

Host IP Address Country
dns1.sanger.ac.uk 193.62.203.30 United Kingdom United Kingdom
dns2.sanger.ac.uk 193.62.203.31 United Kingdom United Kingdom
dns4.sanger.ac.uk 78.129.141.210 United Kingdom United Kingdom

DNS Record Analysis

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htslib.org AAAA 28794 IPV6: 2001:630:206:4::105
htslib.org AAAA 28794 IPV6: 2001:630:206:4::106

Full WHOIS Lookup

Domain Name: HTSLIB.ORG
Registry Domain ID:
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whois.meshdigital.com
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Updated Date:
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Creation Date:
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Registry Expiry Date:
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Registrar Abuse Contact Phone:
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DNSSEC: unsigned
URL of the ICANN Whois
Inaccuracy Complaint Form https://www.icann.org/wicf/)
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